Fusion of 3D and MS imaging data has a great potential for high-throughput plant phenotyping of structural and biochemical as well as physiological traits simultaneously, which is important for decision support in agriculture and for crop breeders in selecting the best genotypes. However, lacking of 3D data integrity of various plant canopy structures and low-quality of MS images caused by the complex illumination effects make a great challenge, especially at the proximal imaging scale. Therefore, this study proposed a novel approach for adaptive data acquisition and radiometric calibration to generate high-quality 3DMPCs of plants. An efficient NBV planning method based on an UGV plant phenotyping system with a multi-sensor-equipped robotic arm was proposed to achieve adaptive data acquisition. The NeREF was employed to predict the DN values of the hemispherical reference for radiometric calibration. For NBV planning, the average total time for single plant at a joint speed of 1.55 rad/s was about 62.8 s, with an average reduction of 18.0% compared to the unplanned. The integrity of the whole-plant data was improved by an average of 23.6% compared to the fixed viewpoints alone. Compared with the ASD measurements, the RMSE of the reflectance spectra obtained from 3DMPCs at different regions of interest was 0.08 with an average decrease of 58.93% compared to the results obtained from the single-frame of MS images without 3D radiometric calibration. The 3D-calibrated plant 3DMPCs improved the predictive accuracy of PLSR for chlorophyll content, with an average increase of 0.07 in R2 and an average decrease of 21.25% in RMSE. Our approach introduced a fresh perspective on generating high-quality 3DMPCs of plants under the natural light condition, enabling more precise analysis of plant morphological and physiological parameters.

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